99




Table 5-10.Itesults ofblastn search forlI35R C
 Score E
Sequences producing significant alignments: (Bits) Value


gi|56324617|emb|CR646752.3|CNSOEYO6 Tetraodon nig~roviridis full-length DNA 91.7 2e-15
gi|56242288|emb|CR644097.2|CNSOEVYF Tetraodon nig~roviridis full-length DNA 91.7 2e-15
gi|34850459|dbj |ABl20133.1| Pleuronectes yokohamae UGT1B2 mRNA 69.9 9e-09
gi|71679708|gb|BC100055.1| Danio rerio cDNA clone IMAGE:7284571, partial cd 60.0 Be-06
gi|46518141|emb|BX005348.9| Zebrafish DNA sequence from clone... 60.0 Be-06
gi|46016516|emb|BX323548.11| Zebrafish DNA sequence from clon... 60.0 Be-06
gi|68369305|ref|XM 682293.1| PREDICTED: Danio rerio similar to UGT1, mRNA 60.0 Be-06
gi|68369293|ref|XM 681739.1| PREDICTED: Danio rerio similar to UGT1, mRNA 60.0 Be-06


Scores

SeqA Name Len(nt) SeqB Name Len(nt) Score


1 livUGTn 1881 2 I35R C 581 39






livUGTn AGCTTTGATGAGCTCACCAGCAGATATCTCAAGAAGGATGTAGCGGCTCC 840
I35R C -------------------- ------------------- ---------- AAATTCCCAA 10
 ** w

livUGTn GGACATGCCGCGATTTGGCTTTATAGATATGACTTCACCTTGTACAACGA 900
I35R C AGACATTCCTGAAAATG-- -TCAAAGTGATGAAGTGGCTTCCGCAGAATGACCTCTTAGG 67
 **** ** ** *w **w *** * *

livUGTn ATGCCCAATGCGGTCAGAATTGGTGGCATCAACTGTGCCAAAGTCCGCGC 960
I35R C TTTGTTTACACGTCCTCTAACCGTAATAAATAGACACCCGGCCATCCCCC 127
 ** ** ** ** *** ** *

livUGTn GATCTGGAGGAGTTCGTGGACGGTTCTGGAGATCACGGCTTACGTATTGC 1020
I35R C ACACACATCTATCTATCACACAGGTCTATGATTATCGATTATCGA-CGTTTCCAGC 185
 wwww ** ** *w *** w

livUGTn TCCTTCGTGTCCGAGCTGCCGGAGTTCAAAGCCCG- -- -GGAGTTTTTCGAGGCTTTTCG 1076
I35R C TAA- -CACTACTTGGATACTTTGGTCAAAAACTCACACCGAAGGTCTAAAA--CA 240
 * ** *** www ** *

livUGTn GCAGATTCCTCAGAGGGTTCTGTGGCGATACACCGGGGTCTCCAAAA TCCG 1136
I35R C GTTCCTGTTTTAAACAGCGTTAAAATT -TAAATCTGAAAGATTCGAGGAAATATAATGGT 299
 * www www *** *w *

livUGTn AAATGTCTA- -AGTGATGAGGTGGCTTCCGCAGAACGACCTCTTA- ---GCACACCCCAA 1190
I35R C GCATAATAATAATTTCCTTTTTTCTTTCCTTTCATCGCCGTTAAGCACCA 359
 ** * **** www ** *w ***********

livUGTn GGCTAAGGTGTTCATCACGCACGGAGGAGCCCATGGCATCTCAGACGACG 1250
I35R C GGCTAAGGTGTTCATCACGCACGGAGGAACCCATGGCATCTCAGACGACG 419
 **************************** *******************************

livUGTn CGTGCCGATGGTGATGATCCCGCTGTTCGGAGATCAGGTAGCATCAGAGT 1310
I35R C CGTGCCGATGGTGATGATCCCGCTGTTCGGAGATCAGGTAGCATCAGAGT 479
 ****************************************wwwwwwwwww

livUGTn GCTGCGTGGAGTCGCAGAGAGCCTGACCATGTTCGACCTGCTAGACGTGG 1370
I35R C GCTGCGTGAAGTCGCAGAGAGCCTGACCATGTTCGACCTGCTAGACGTGG 539
 wwwwwwww wwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwwww

livUGTn GGCACTCAGGAAAGTCCTCAACAACAAGCGCTACAAAGAGAGTCCGTTTT 1430
I35R C GGCACTCAGGAAAGTCCTCAACAACGAGCGCTAAAAAAAAA ------------------ 581


Figure 5-15. Multiple sequence alignment between livUGTn and 3 5RC.


Part of livUGTn sequence omitted for clarity.