Figure 2-14. Interactions of b subunits of unequal lengths. An epitope-tag system novel to F1Fo ATP synthase studies was established in order to determine whether b subunits of unequal length could interact to form the dimer in an intact and functional enzyme complex. The b subunit was expressed with a V5- epitope tag at its C-terminus (represented by the 's' shaped red line) and b , was expressed with a histidine tag at its N-terminus (represented by the curved orange line). The lightning bolt indicates a deletion and the orange patch represents an insertion of amino acids. The histidine tag allowed for purification on a Nickel affinity column and the V5-tag allowed us to detect the presence of the b subunit after Ni-purification using Western blot analysis. Expression of the two different epitope-tagged b subunits in the same cell leads to three distinct interactions within an F1Fo ATP synthase complex (1) a homodimer of b z_,, (2) a homodimer of b+7-his and (3) a heterodimer consisting of both the shortened and lengthened b subunit.